Title
X-ray Structure of the WD40 domain of HOPS subunit Vps11 from Yeast
Method
X-RAY DIFFRACTION; 2.22 Å
Target Sequence
Sequence
Target Structure
Chain B
Quaternary State
Monomer
Oligo Target Structure
Biounit 1 ; Biounit 2 ; Biounit 3

Submitted model details

1
379
Structure (35 - 379, 345 res.)
Phyre2, model-1 (15 - 377)
RoseTTAFold, model-1 (10 - 379)
RoseTTAFold, model-2 (10 - 379)
RoseTTAFold, model-3 (10 - 379)
RoseTTAFold, model-4 (10 - 379)
RoseTTAFold, model-5 (10 - 379)
SWISS-MODEL, model-1 (71 - 376)
SWISS-MODEL, model-2 (72 - 376)
SWISS-MODEL, model-3 (31 - 281)
SWISS-MODEL, model-4 (71 - 288)
IntFOLD3-TS, model-1 (1 - 379)
IntFOLD3-TS, model-2 (1 - 379)
IntFOLD3-TS, model-3 (1 - 379)
IntFOLD3-TS, model-4 (1 - 379)
IntFOLD3-TS, model-5 (1 - 379)
IntFOLD6-TS, model-1 (1 - 379)
IntFOLD6-TS, model-2 (1 - 379)
IntFOLD6-TS, model-3 (1 - 379)
IntFOLD6-TS, model-4 (1 - 379)
IntFOLD6-TS, model-5 (1 - 379)
pureAF2_orig, model-1 (1 - 379)
pureAF2_notemp, model-1 (1 - 379)
Naive AlphaFoldDB 90, model-1 (30 - 379)
Naive AlphaFoldDB 100, model-1 (30 - 379)
RocketX, model-1 (1 - 379)
RocketX, model-2 (1 - 379)
RocketX, model-3 (1 - 379)
RocketX, model-4 (1 - 379)
RocketX, model-5 (1 - 379)
OpenComplex, model-1 (1 - 379)
OpenComplex, model-2 (1 - 379)
OpenComplex, model-3 (1 - 379)
OpenComplex, model-4 (1 - 379)
OpenComplex, model-5 (1 - 379)
SADA, model-1 (1 - 379)
IntFOLD7, model-1 (1 - 379)
IntFOLD7, model-2 (1 - 379)
IntFOLD7, model-3 (1 - 379)
IntFOLD7, model-4 (1 - 379)
IntFOLD7, model-5 (1 - 379)
ZJUT-DeepAssembly, model-1 (1 - 379)
MultiDFold, model-1 (1 - 379)
MEGA-EvoGen, model-1 (1 - 379)
AIRFold, model-1 (1 - 379)
AIRFold, model-2 (1 - 379)
AIRFold, model-3 (1 - 379)
AIRFold, model-4 (1 - 379)
AIRFold, model-5 (1 - 379)
ManiFold, model-1 (1 - 379)
PAthreader, model-1 (1 - 379)
PAthreader2, model-1 (1 - 379)
BestSingleStructuralTemplate, model-1 (1 - 379)

Colors: Query Sequence | Target Structure Coordinates | Model #1 Coordinates

3D Prediction

Target Structure

Server Evaluations

Server Name
Predictions Resp. time
(hh:mm:ss)
From To Cov. (%) lDDT lDDT Cα Avg. lDDT-BS Avg. lDDT-BS details Model Conf. lDDT QS-score Oligo details QS-score Best Match lDDT Oligo MM-align TM-score MM-align RMSD QScore CAD-Score GDT_HA RMSD GDC Model Conf. MaxSub TM-score