Title
Crystal structure of C. difficile SpoVD in complex with ampicillin
Method
X-RAY DIFFRACTION; 2.2 Å
Target Sequence
Sequence
Target Structure
Chain A
Quaternary State
HOMO-Oligomer
Oligo Target Structure
Biounit 1

Submitted model details

1
548
Structure (19 - 548, 530 res.)
Robetta, model-1 (1 - 548)
Robetta, model-2 (1 - 548)
Robetta, model-3 (1 - 548)
Robetta, model-4 (1 - 548)
Robetta, model-5 (1 - 548)
RoseTTAFold, model-1 (1 - 548)
RoseTTAFold, model-2 (1 - 548)
RoseTTAFold, model-3 (1 - 548)
RoseTTAFold, model-4 (1 - 548)
RoseTTAFold, model-5 (1 - 548)
SWISS-MODEL, model-1 (8 - 547)
SWISS-MODEL, model-2 (2 - 546)
RaptorX, model-1 (1 - 548)
IntFOLD3-TS, model-1 (1 - 548)
IntFOLD3-TS, model-2 (1 - 548)
IntFOLD3-TS, model-3 (1 - 548)
IntFOLD3-TS, model-4 (1 - 548)
IntFOLD3-TS, model-5 (1 - 548)
NaiveBLAST, model-1 (111 - 546)
IntFOLD4-TS, model-1 (1 - 548)
IntFOLD4-TS, model-2 (1 - 548)
IntFOLD4-TS, model-3 (1 - 548)
IntFOLD4-TS, model-4 (1 - 548)
IntFOLD4-TS, model-5 (1 - 548)
IntFOLD5-TS, model-1 (1 - 548)
IntFOLD5-TS, model-2 (1 - 548)
IntFOLD5-TS, model-3 (1 - 548)
IntFOLD5-TS, model-4 (1 - 548)
IntFOLD5-TS, model-5 (1 - 548)
IntFOLD6-TS, model-1 (1 - 548)
IntFOLD6-TS, model-2 (1 - 548)
IntFOLD6-TS, model-3 (1 - 548)
IntFOLD6-TS, model-4 (1 - 548)
IntFOLD6-TS, model-5 (1 - 548)
pureAF2_orig, model-1 (1 - 548)
pureAF2_notemp, model-1 (1 - 548)
ZlxFold, model-1 (1 - 548)
PaFold, model-1 (1 - 548)
PaFold_v2, model-1 (1 - 548)
RocketX, model-1 (1 - 548)
RocketX, model-10 (1 - 548)
RocketX, model-11 (1 - 548)
RocketX, model-12 (1 - 548)
RocketX, model-2 (1 - 548)
RocketX, model-3 (1 - 548)
RocketX, model-4 (1 - 548)
RocketX, model-5 (1 - 548)
RocketX, model-6 (1 - 548)
RocketX, model-7 (1 - 548)
RocketX, model-8 (1 - 548)
RocketX, model-9 (1 - 548)
OpenComplex, model-1 (1 - 548)
SADA, model-1 (1 - 548)
BestSingleStructuralTemplate, model-1 (1 - 548)

Colors: Query Sequence | Target Structure Coordinates | Model #1 Coordinates

3D Prediction

Target Structure

Server Evaluations

Server Name
Predictions Resp. time
(hh:mm:ss)
From To Cov. (%) lDDT lDDT Cα Avg. lDDT-BS Avg. lDDT-BS details Model Conf. lDDT QS-score Oligo details QS-score Best Match lDDT Oligo MM-align TM-score MM-align RMSD QScore CAD-Score GDT_HA RMSD GDC Model Conf. MaxSub TM-score