Title
Crystal structure of Streptomyces tokunonesis TokK with hydroxycobalamin, 5'-deoxyadenosine, and methionine
Method
X-RAY DIFFRACTION; 1.791 Å
Target Sequence
Sequence
Target Structure
Chain B
Quaternary State
Monomer
Oligo Target Structure
Biounit 1 ; Biounit 2

Submitted model details

1
681
Structure (7 - 672, 666 res.)
Robetta, model-1 (1 - 681)
Robetta, model-2 (1 - 681)
Robetta, model-3 (1 - 681)
Robetta, model-4 (1 - 681)
Robetta, model-5 (1 - 681)
Phyre2, model-1 (11 - 508)
RoseTTAFold, model-1 (1 - 681)
RoseTTAFold, model-2 (1 - 681)
RoseTTAFold, model-3 (1 - 681)
RoseTTAFold, model-4 (1 - 681)
RoseTTAFold, model-5 (1 - 681)
SWISS-MODEL, model-1 (8 - 445)
SWISS-MODEL, model-2 (104 - 392)
SWISS-MODEL, model-3 (95 - 384)
SWISS-MODEL, model-4 (64 - 393)
RaptorX, model-1 (1 - 681)
IntFOLD3-TS, model-1 (1 - 681)
IntFOLD3-TS, model-2 (1 - 681)
IntFOLD3-TS, model-3 (1 - 681)
IntFOLD3-TS, model-4 (1 - 681)
IntFOLD3-TS, model-5 (1 - 681)
NaiveBLAST, model-1 (205 - 373)
IntFOLD4-TS, model-1 (1 - 681)
IntFOLD4-TS, model-2 (1 - 681)
IntFOLD4-TS, model-3 (1 - 681)
IntFOLD4-TS, model-4 (1 - 681)
IntFOLD4-TS, model-5 (1 - 681)
PRIMO, model-1 (1 - 565)
PRIMO_BST_3D, model-1 (6 - 673)
IntFOLD5-TS, model-1 (1 - 681)
IntFOLD5-TS, model-2 (1 - 681)
IntFOLD5-TS, model-3 (1 - 681)
IntFOLD5-TS, model-4 (1 - 681)
IntFOLD5-TS, model-5 (1 - 681)
IntFOLD6-TS, model-1 (1 - 681)
IntFOLD6-TS, model-2 (1 - 681)
IntFOLD6-TS, model-3 (1 - 681)
IntFOLD6-TS, model-4 (1 - 681)
IntFOLD6-TS, model-5 (1 - 681)
pureAF2_orig, model-1 (1 - 681)
pureAF2_notemp, model-1 (1 - 681)
ZlxFold, model-1 (1 - 681)
PaFold, model-1 (1 - 681)
HeliXonAI, model-1 (1 - 681)
PaFold_v2, model-1 (1 - 681)
RocketX, model-1 (1 - 681)
RocketX, model-2 (1 - 681)
RocketX, model-3 (1 - 681)
RocketX, model-4 (1 - 681)
RocketX, model-5 (1 - 681)
RocketX, model-6 (1 - 681)

Colors: Query Sequence | Target Structure Coordinates | Model #1 Coordinates

3D Prediction

Target Structure

Server Evaluations

Server Name
Predictions Resp. time
(hh:mm:ss)
From To Cov. (%) lDDT lDDT Cα Avg. lDDT-BS Avg. lDDT-BS details Model Conf. lDDT QS-score Oligo details QS-score Best Match lDDT Oligo MM-align TM-score MM-align RMSD QScore CAD-Score GDT_HA RMSD GDC Model Conf. MaxSub TM-score