Title
Crystal Structure of the YaeQ Family Protein VPA0551 from Vibrio parahaemolyticus
Method
X-RAY DIFFRACTION; 2.7 Å
Target Sequence
Sequence
Target Structure
Chain B
Quaternary State
Monomer
Oligo Target Structure
Biounit 1 ; Biounit 2 ; Biounit 3 ; Biounit 4

Submitted model details

1
184
Structure (6 - 184, 179 res.)
Robetta, model-1 (1 - 184)
Robetta, model-2 (1 - 184)
Robetta, model-3 (1 - 184)
Robetta, model-4 (1 - 184)
Robetta, model-5 (1 - 184)
Phyre2, model-1 (3 - 180)
RoseTTAFold, model-1 (1 - 184)
RoseTTAFold, model-2 (1 - 184)
RoseTTAFold, model-3 (1 - 184)
RoseTTAFold, model-4 (1 - 184)
RoseTTAFold, model-5 (1 - 184)
SWISS-MODEL, model-1 (5 - 182)
RaptorX, model-1 (1 - 184)
IntFOLD3-TS, model-1 (1 - 184)
IntFOLD3-TS, model-2 (1 - 184)
IntFOLD3-TS, model-3 (1 - 184)
IntFOLD3-TS, model-4 (1 - 184)
IntFOLD3-TS, model-5 (1 - 184)
NaiveBLAST, model-1 (5 - 179)
IntFOLD4-TS, model-1 (1 - 184)
IntFOLD4-TS, model-2 (1 - 184)
IntFOLD4-TS, model-3 (1 - 184)
IntFOLD4-TS, model-4 (1 - 184)
IntFOLD4-TS, model-5 (1 - 184)
PRIMO, model-1 (7 - 184)
PRIMO_BST_3D, model-1 (7 - 184)
PRIMO_HHS_3D, model-1 (3 - 179)
PRIMO_HHS_CL, model-1 (3 - 181)
PRIMO_BST_CL, model-1 (7 - 184)
IntFOLD5-TS, model-1 (1 - 184)
IntFOLD5-TS, model-2 (1 - 184)
IntFOLD5-TS, model-3 (1 - 184)
IntFOLD5-TS, model-4 (1 - 184)
IntFOLD5-TS, model-5 (1 - 184)
IntFOLD6-TS, model-1 (1 - 184)
IntFOLD6-TS, model-2 (1 - 184)
IntFOLD6-TS, model-3 (1 - 184)
IntFOLD6-TS, model-4 (1 - 184)
IntFOLD6-TS, model-5 (1 - 184)
pureAF2_orig, model-1 (1 - 184)
pureAF2_notemp, model-1 (1 - 184)
ZlxFold, model-1 (1 - 184)
PaFold, model-1 (1 - 184)
HeliXonAI, model-1 (1 - 184)
PaFold_v2, model-1 (1 - 184)
RocketX, model-1 (1 - 184)
RocketX, model-2 (1 - 184)
RocketX, model-3 (1 - 184)
RocketX, model-4 (1 - 184)
RocketX, model-5 (1 - 184)
RocketX, model-6 (1 - 184)
BestSingleStructuralTemplate, model-1 (1 - 184)

Colors: Query Sequence | Target Structure Coordinates | Model #1 Coordinates

3D Prediction

Target Structure

Server Evaluations

Server Name
Predictions Resp. time
(hh:mm:ss)
From To Cov. (%) lDDT lDDT Cα Avg. lDDT-BS Avg. lDDT-BS details Model Conf. lDDT QS-score Oligo details QS-score Best Match lDDT Oligo MM-align TM-score MM-align RMSD QScore CAD-Score GDT_HA RMSD GDC Model Conf. MaxSub TM-score