Title
Crystal structure of RBR E3 ligase RNF216 with ubiquitin
Method
X-RAY DIFFRACTION; 2.39 Å
Target Sequence
Sequence
Target Structure
Chain A
Quaternary State
HETERO-Oligomer
Oligo Target Structure
Biounit 1 ; Biounit 2

Submitted model details

1
277
Structure (93 - 265, 173 res.)
Robetta, model-1 (1 - 277)
Robetta, model-2 (1 - 277)
Robetta, model-3 (1 - 277)
Robetta, model-4 (1 - 277)
Robetta, model-5 (1 - 277)
Phyre2, model-1 (1 - 274)
RoseTTAFold, model-1 (1 - 277)
RoseTTAFold, model-2 (1 - 277)
RoseTTAFold, model-3 (1 - 277)
RoseTTAFold, model-4 (1 - 277)
RoseTTAFold, model-5 (1 - 277)
SWISS-MODEL, model-1 (6 - 228)
SWISS-MODEL, model-2 (8 - 228)
SWISS-MODEL, model-3 (6 - 203)
SWISS-MODEL, model-4 (3 - 203)
SWISS-MODEL, model-5 (3 - 206)
RaptorX, model-1 (1 - 277)
IntFOLD3-TS, model-1 (1 - 277)
IntFOLD3-TS, model-2 (1 - 277)
IntFOLD3-TS, model-3 (1 - 277)
IntFOLD3-TS, model-4 (1 - 277)
IntFOLD3-TS, model-5 (1 - 277)
IntFOLD4-TS, model-1 (1 - 277)
IntFOLD4-TS, model-2 (1 - 277)
IntFOLD4-TS, model-3 (1 - 277)
IntFOLD4-TS, model-4 (1 - 277)
IntFOLD4-TS, model-5 (1 - 277)
PRIMO, model-1 (3 - 277)
PRIMO_BST_3D, model-1 (14 - 274)
PRIMO_BST_CL, model-1 (3 - 277)
IntFOLD5-TS, model-1 (1 - 277)
IntFOLD5-TS, model-2 (1 - 277)
IntFOLD5-TS, model-3 (1 - 277)
IntFOLD5-TS, model-4 (1 - 277)
IntFOLD5-TS, model-5 (1 - 277)
IntFOLD6-TS, model-1 (1 - 277)
IntFOLD6-TS, model-2 (1 - 277)
IntFOLD6-TS, model-3 (1 - 277)
IntFOLD6-TS, model-4 (1 - 277)
IntFOLD6-TS, model-5 (1 - 277)
pureAF2_orig, model-1 (1 - 277)
pureAF2_notemp, model-1 (1 - 277)
ZlxFold, model-1 (1 - 277)
Naive AlphaFoldDB 90, model-1 (3 - 277)
Naive AlphaFoldDB 100, model-1 (3 - 277)
PaFold, model-1 (1 - 277)
HeliXonAI, model-1 (1 - 277)
PaFold_v2, model-1 (1 - 277)
RocketX, model-1 (1 - 277)
RocketX, model-2 (1 - 277)
RocketX, model-3 (1 - 277)
RocketX, model-4 (1 - 277)
RocketX, model-5 (1 - 277)
BestSingleStructuralTemplate, model-1 (1 - 277)

Colors: Query Sequence | Target Structure Coordinates | Model #1 Coordinates

3D Prediction

Target Structure

Server Evaluations

Server Name
Predictions Resp. time
(hh:mm:ss)
From To Cov. (%) lDDT lDDT Cα Avg. lDDT-BS Avg. lDDT-BS details Model Conf. lDDT QS-score Oligo details QS-score Best Match lDDT Oligo MM-align TM-score MM-align RMSD QScore CAD-Score GDT_HA RMSD GDC Model Conf. MaxSub TM-score