Target Details - 2016-12-03_00000044_1 | 5f0p [A]

Title
Structure of retromer VPS26-VPS35 subunits bound to SNX3 and DMT1(L557M) (SeMet labeled)
Method
X-RAY DIFFRACTION; 2.78 Å
Target Sequence
Sequence
Target Structure
Chain A
Quarternary State
HOMO-Oligomer (Target sequence is part of a HETERO-Oligomer)
Oligo Target Structure
Biounit 1

Submitted model details

1
462
Structure (4 - 461, 458 res.)
HHpredB, model-1 (1 - 462)
Robetta, model-1 (1 - 462)
Robetta, model-2 (1 - 462)
Robetta, model-3 (1 - 462)
Robetta, model-4 (1 - 462)
Robetta, model-5 (1 - 462)
IntFOLD2-TS, model-1 (1 - 462)
IntFOLD2-TS, model-2 (1 - 462)
IntFOLD2-TS, model-3 (1 - 462)
IntFOLD2-TS, model-4 (1 - 462)
IntFOLD2-TS, model-5 (1 - 462)
SWISS-MODEL, model-1 (225 - 428)
SWISS-MODEL, model-2 (94 - 176)
RaptorX, model-1 (1 - 462)
Princeton_TEMPLATE, model-1 (1 - 462)
Princeton_TEMPLATE, model-2 (1 - 462)
Princeton_TEMPLATE, model-3 (1 - 462)
Princeton_TEMPLATE, model-4 (1 - 462)
Princeton_TEMPLATE, model-5 (1 - 462)
SPARKS-X, model-1 (1 - 462)
SPARKS-X, model-2 (1 - 462)
SPARKS-X, model-3 (1 - 462)
SPARKS-X, model-4 (1 - 462)
SPARKS-X, model-5 (1 - 462)
RBO Aleph, model-1 (1 - 462)
RBO Aleph, model-2 (1 - 462)
RBO Aleph, model-3 (1 - 462)
RBO Aleph, model-4 (1 - 462)
RBO Aleph, model-5 (1 - 462)
IntFOLD3-TS, model-1 (1 - 462)
IntFOLD3-TS, model-2 (1 - 462)
IntFOLD3-TS, model-3 (1 - 462)
IntFOLD3-TS, model-4 (1 - 462)
IntFOLD3-TS, model-5 (1 - 462)
NaiveBLAST, model-1 (375 - 462)
IntFOLD4-TSb, model-1 (1 - 462)
IntFOLD4-TSb, model-2 (1 - 462)
IntFOLD4-TSb, model-3 (1 - 462)
IntFOLD4-TSb, model-4 (1 - 462)
IntFOLD4-TSb, model-5 (1 - 462)
PRIMO, model-1 (1 - 462)
PRIMO, model-2 (1 - 462)
PRIMO_BST_3D, model-1 (83 - 460)
PRIMO_BST_3D, model-2 (83 - 460)
PRIMO_HHS_CL, model-1 (114 - 136)
PRIMO_HHS_CL, model-2 (114 - 136)
PRIMO_BST_CL, model-1 (1 - 462)
PRIMO_BST_CL, model-2 (1 - 462)

Colors: Query Sequence | Target Structure Coordinates | Model #1 Coordinates

3D Prediction

Target Structure

Server Evaluations

Server Name
Predictions Resp. time
(hh:mm:ss)
From To Cov. (%) lDDT lDDT Cα Avg. lDDT-BS Avg. lDDT-BS details Model Conf. lDDT QS-score Oligo details QS-score Best Match lDDT Oligo MM-align TM-score MM-align RMSD QScore CAD-Score GDT_HA RMSD GDC Model Conf. MaxSub TM-score